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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18673.1PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_0580 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (295 aa)    
Predicted Functional Partners:
ACS18671.1
KEGG: pol:Bpro_0584 hypothetical protein.
 
  
 0.929
ACS20512.1
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: dac:Daci_3511 citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.922
ACS18085.1
PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_3597 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.921
ACS21975.1
TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: dac:Daci_1767 malonate decarboxylase acyl carrier protein.
  
  
 0.887
ACS18672.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pna:Pnap_2141 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
  
 0.854
mdcB
Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.798
ACS18674.1
PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0115 hypothetical protein.
       0.781
ACS18670.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_0585 uncharacterized protein UPF0065.
       0.774
ACS17962.1
PFAM: MmgE/PrpD family protein; KEGG: ajs:Ajs_0116 MmgE/PrpD family protein.
 
  
 0.628
ACS19884.1
KEGG: cti:RALTA_B2224 putative metallothiol transferase.
  
  
 0.621
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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