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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18686.1KEGG: pna:Pnap_2762 hypothetical protein. (122 aa)    
Predicted Functional Partners:
ACS18685.1
PFAM: protein of unknown function DUF1446; KEGG: pna:Pnap_2761 hypothetical protein.
 
     0.956
ACS18687.1
PFAM: conserved hypothetical protein; KEGG: pna:Pnap_2763 hypothetical protein.
 
     0.708
ACS18684.1
PFAM: conserved hypothetical protein; KEGG: bbr:BB4843 hypothetical protein.
       0.598
ACS18688.1
KEGG: dac:Daci_0716 hypothetical protein.
       0.507
FAP92
FAP92; KEGG: FAP92; flagellar associated protein.
       0.404
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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