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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18713.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4004 ABC transporter-related protein. (467 aa)    
Predicted Functional Partners:
ACS18712.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4003 binding-protein-dependent transport systems inner membrane component.
  
 0.962
ACS18711.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4002 binding-protein-dependent transport systems inner membrane component.
 
  
 0.952
ACS18710.1
PFAM: extracellular solute-binding protein family 5; KEGG: mpo:Mpop_3809 extracellular solute-binding protein family 5.
 
  
 0.944
ACS18709.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dac:Daci_4462 TonB-dependent siderophore receptor.
       0.777
ACS21835.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0424 binding-protein-dependent transport systems inner membrane component.
  
 0.622
ACS17867.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3326 binding-protein-dependent transport systems inner membrane component.
  
 0.618
ACS17332.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6712 ABC transporter permease.
  
 0.616
ACS22228.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2189 binding-protein-dependent transport systems inner membrane component.
  
 0.597
ACS17866.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3325 binding-protein-dependent transport systems inner membrane component.
 
  
 0.595
ACS22227.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2188 binding-protein-dependent transport systems inner membrane component.
 
  
 0.591
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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