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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDAspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (133 aa)    
Predicted Functional Partners:
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
 
 
 0.996
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.959
ACS21300.1
TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_2912 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.911
ACS18229.1
Beta-alanine--pyruvate transaminase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_4286 beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.909
ACS21393.1
PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A1898 beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.909
ACS16973.1
PFAM: Aldehyde Dehydrogenase; KEGG: rfr:Rfer_0880 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
ACS18301.1
PFAM: Aldehyde Dehydrogenase; KEGG: aav:Aave_2805 aldehyde dehydrogenase.
    
 0.905
ACS18971.1
PFAM: Aldehyde Dehydrogenase; KEGG: pol:Bpro_2290 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
    
 0.905
ACS22548.1
PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_A1842 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
ACS22834.1
PFAM: Aldehyde Dehydrogenase; KEGG: pfo:Pfl01_2261 aldehyde dehydrogenase.
    
 0.905
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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