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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18718.1Hypothetical protein; KEGG: rru:Rru_A0734 thioesterase superfamily protein. (154 aa)    
Predicted Functional Partners:
ACS22010.1
KEGG: reh:H16_B1412 putative glutathione S-transferase.
  
     0.538
ACS20480.1
PFAM: cytochrome c class I; KEGG: dac:Daci_5620 cytochrome c, mono-and diheme variant-like protein.
  
     0.512
ACS22320.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_5013 acetyltransferase.
  
     0.463
ACS18717.1
PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: pna:Pnap_4159 nuclease.
       0.409
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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