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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18721.1Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pna:Pnap_4162 XRE family transcriptional regulator. (102 aa)    
Predicted Functional Partners:
ACS18632.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_1806 XRE family transcriptional regulator.
 
   
 0.727
ACS17259.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_1806 XRE family transcriptional regulator.
 
     0.716
ACS18541.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mms:mma_2537 hypothetical protein.
 
     0.687
ACS18722.1
KEGG: aav:Aave_0683 putative lipoprotein.
 
     0.662
ACS18528.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hne:HNE_2543 DNA-binding protein.
 
   
 0.653
ACS21141.1
PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: tmz:Tmz1t_2338 helix-turn-helix domain protein.
 
   
 0.632
ACS19575.1
TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bpt:Bpet2255 hypothetical protein.
   
 
 0.613
ACS19897.1
PFAM: HipA domain protein; KEGG: nwi:Nwi_2079 hypothetical protein.
   
 
 0.613
ACS22491.1
PFAM: HipA domain protein; KEGG: vei:Veis_0672 HipA domain-containing protein.
   
 
 0.613
ACS22493.1
TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bpe:BP2622 HipA-like protein.
   
 
 0.613
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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