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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18728.1KEGG: pna:Pnap_4170 putative conjugal transfer TRAF transmembrane protein. (177 aa)    
Predicted Functional Partners:
ACS18726.1
KEGG: ajs:Ajs_2656 hypothetical protein.
 
     0.953
ACS18727.1
KEGG: dac:Daci_2718 hypothetical protein.
 
     0.953
ACS18725.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bpt:Bpet4565 putative partition protein.
 
     0.951
ACS18724.1
Plasmid replication initiator protein-like protein; KEGG: bpt:Bpet4564 putative replication protein.
 
     0.940
ACS18723.1
KEGG: bam:Bamb_1984 hypothetical protein.
 
     0.923
ACS18729.1
KEGG: nwi:Nwi_2851 hypothetical protein.
 
     0.875
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.833
ACS18719.1
PFAM: protein of unknown function DUF736; KEGG: pna:Pnap_4161 hypothetical protein.
 
     0.803
ACS18717.1
PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: pna:Pnap_4159 nuclease.
 
   
 0.792
ACS22412.1
PFAM: TRAG family protein; KEGG: bbt:BBta_p0247 putative type IV secretory pathway protein VirD4.
 
     0.791
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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