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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18744.1PFAM: DSBA oxidoreductase; KEGG: bcm:Bcenmc03_4435 DsbA oxidoreductase. (226 aa)    
Predicted Functional Partners:
ACS18502.1
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: nha:Nham_4429 arsenate reductase.
   
 
 0.662
ACS18607.1
KEGG: bpt:Bpet1022 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related.
   
 
 0.662
ACS20379.1
PFAM: arsenate reductase and related; KEGG: pna:Pnap_1087 arsenate reductase and related; Belongs to the ArsC family.
   
 
 0.662
ACS18743.1
PFAM: aminotransferase class I and II; KEGG: bch:Bcen2424_6907 aminotransferase, class I and II.
       0.571
ACS19586.1
PFAM: NADPH-dependent FMN reductase; KEGG: nmu:Nmul_A1574 NADPH-dependent FMN reductase.
 
    0.566
ACS22309.1
PFAM: NADPH-dependent FMN reductase; KEGG: acr:Acry_2828 NADPH-dependent FMN reductase.
 
    0.530
ACS20165.1
PFAM: globin; KEGG: lch:Lcho_0052 globin.
  
  
 0.479
ACS20650.1
PFAM: globin; KEGG: pna:Pnap_0847 globin.
  
  
 0.479
ACS18551.1
PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0879 NADPH-dependent FMN reductase.
 
    0.447
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
   0.417
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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