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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18749.1PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mms:mma_2793 transposase. (269 aa)    
Predicted Functional Partners:
ACS18748.1
PFAM: Integrase catalytic region; KEGG: mms:mma_2792 transposase IstA.
  
 0.955
ACS17336.1
PFAM: Integrase catalytic region; KEGG: pol:Bpro_5344 integrase, catalytic region.
 
  
 0.803
ACS17543.1
PFAM: Integrase catalytic region; KEGG: pol:Bpro_5344 integrase, catalytic region.
 
  
 0.803
ACS20927.1
PFAM: Integrase catalytic region; KEGG: pol:Bpro_5344 integrase, catalytic region.
 
  
 0.803
ACS22437.1
PFAM: Integrase catalytic region; KEGG: psa:PST_3409 ISPsy14, transposase.
 
  
 0.801
ACS18472.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.760
ACS19327.1
Transposase; KEGG: eba:p2A256 transposase.
 
     0.760
ACS17334.1
KEGG: net:Neut_1121 hypothetical protein.
  
 
 0.642
ACS18747.1
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
       0.558
ACS18746.1
KEGG: bcm:Bcenmc03_3233 nitrile hydratase, alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain.
       0.479
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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