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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18752.1PFAM: PepSY-associated TM helix domain protein; KEGG: mms:mma_0065 hypothetical protein. (519 aa)    
Predicted Functional Partners:
ACS18753.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0066 TonB-dependent receptor.
 
  
 0.947
ACS21631.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rso:RSc0800 putative ferrisiderophore receptor signal peptide protein.
 
  
 0.569
ACS18754.1
KEGG: vei:Veis_4741 hypothetical protein.
       0.489
ACS22440.1
KEGG: rfr:Rfer_3041 ABC transporter.
  
     0.486
ACS19801.1
KEGG: mes:Meso_2586 hypothetical protein.
  
     0.476
ACS21378.1
PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: smd:Smed_1186 protein of unknown function DUF461.
  
    0.448
ACS17159.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bbr:BB2668 putative succinylglutamate desuccinylase.
  
     0.406
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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