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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18761.1Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rfr:Rfer_2806 GntR family transcriptional regulator. (215 aa)    
Predicted Functional Partners:
ACS22190.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: swi:Swit_1150 GntR family transcriptional regulator.
  
  
 0.776
ACS20088.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_1715 transcriptional regulator, GntR family.
  
     0.774
ACS22621.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: mes:Meso_2357 transcriptional regulator, GntR family.
  
     0.770
ACS17091.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_1052 transcriptional regulator, GntR family.
  
     0.768
ACS17993.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0000377 probable transcriptional regulator protein, GntR family.
  
  
 0.762
ACS19496.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_3567 GntR domain-containing protein.
  
  
 0.731
ACS18231.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ppg:PputGB1_0666 regulatory protein GntR HTH.
  
  
 0.621
ACS18762.1
methylmalonyl-CoA mutase, large subunit; KEGG: pol:Bpro_2161 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
       0.595
ACS18764.1
TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: rfr:Rfer_2804 arginine/ornithine transport system ATPase.
       0.561
ACS18763.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_2162 GCN5-related N-acetyltransferase.
       0.523
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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