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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18834.1PFAM: phosphoribosyltransferase; KEGG: aav:Aave_1435 phosphoribosyltransferase. (174 aa)    
Predicted Functional Partners:
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.859
hisZ
histidyl-tRNA synthetase 2; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
       0.758
ACS20703.1
KEGG: pol:Bpro_0907 hypothetical protein.
  
     0.678
ACS18831.1
KEGG: rfr:Rfer_2298 hypothetical protein.
       0.592
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: geo:Geob_0493 flagellar hook-basal body complex subunit FliE.
   
   0.576
fliE-2
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: reh:H16_B2367 flagellar hook-basal body complex protein.
   
   0.576
ACS18906.1
PFAM: flagellar hook capping protein; KEGG: hch:HCH_04072 flagellar hook capping protein.
    
   0.572
ACS20810.1
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.572
ACS18946.1
KEGG: rfr:Rfer_2901 putative inner membrane transmembrane protein.
 
     0.570
ACS18830.1
HflC protein; HflC and HflK could regulate a protease.
  
    0.565
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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