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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18847.1KEGG: dac:Daci_2822 hypothetical protein; Belongs to the UPF0311 family. (158 aa)    
Predicted Functional Partners:
ACS18848.1
PFAM: aldo/keto reductase; KEGG: aav:Aave_3016 aldo/keto reductase.
     
 0.770
ACS21012.1
PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2.
 
  
 0.685
ACS18849.1
PFAM: Chromate transporter; KEGG: rfr:Rfer_2757 chromate transporter.
       0.683
ACS18850.1
PFAM: Chromate transporter; KEGG: vei:Veis_3786 chromate transporter.
       0.683
ACS21014.1
PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_0796 feruloyl-CoA synthase.
  
   
 0.491
ACS21401.1
PFAM: cytochrome P450; FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bja:blr2882 bifunctional P-450:NADPH-P450 reductase.
 
 
 0.486
ACS18851.1
TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: aav:Aave_4029 ribonuclease BN.
       0.484
ACS19941.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_1856 4-carboxymuconolactone decarboxylase.
 
   
 0.459
ACS16734.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dar:Daro_3240 feruloyl-CoA synthase.
  
   
 0.452
ACS20213.1
PFAM: ferredoxin; FAD-binding 9 siderophore-interacting domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; cytochrome P450; KEGG: reh:H16_B1279 two domain protein: cytochrome P450.
  
 
 0.444
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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