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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18857.1KEGG: pol:Bpro_3010 hypothetical protein. (157 aa)    
Predicted Functional Partners:
ACS18856.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3011 twin-arginine translocation pathway signal.
 
    0.927
ACS18858.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pol:Bpro_3009 protein of unknown function DUF112, transmembrane.
 
  
 0.917
ACS19629.1
KEGG: pol:Bpro_2010 hypothetical protein.
     
  0.900
ACS22747.1
KEGG: smd:Smed_0362 putative tricarboxylic transport membrane protein.
     
  0.900
ACS22270.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dac:Daci_3339 mandelate racemase/muconate lactonizing protein.
 
     0.510
ACS18295.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_3098 mandelate racemase/muconate lactonizing enzyme.
 
     0.504
ACS18373.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_2593 tripartite ATP-independent periplasmic transporter DctQ.
  
     0.498
ACS20303.1
PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_1243 extracellular solute-binding protein.
  
     0.453
ACS16980.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pna:Pnap_3237 hypothetical protein.
  
  
 0.426
ACS17902.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
  
  
 0.426
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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