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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18858.1PFAM: protein of unknown function DUF112 transmembrane; KEGG: pol:Bpro_3009 protein of unknown function DUF112, transmembrane. (502 aa)    
Predicted Functional Partners:
ACS18856.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3011 twin-arginine translocation pathway signal.
    0.924
ACS18857.1
KEGG: pol:Bpro_3010 hypothetical protein.
 
  
 0.917
ACS18369.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3516 uncharacterized protein UPF0065.
    0.819
ACS21929.1
PFAM: conserved hypothetical protein; KEGG: reh:H16_B1814 probable extra-cytoplasmic solute receptor.
    0.819
ACS22354.1
PFAM: conserved hypothetical protein; KEGG: reh:H16_A3193 probable extra-cytoplasmic solute receptor.
 
    0.809
ACS18600.1
PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4279 hypothetical protein.
 
    0.808
ACS22102.1
PFAM: conserved hypothetical protein; KEGG: rme:Rmet_5147 uncharacterized protein UPF0065.
 
    0.808
ACS22748.1
PFAM: conserved hypothetical protein; KEGG: oca:OCAR_5201 trap-t family transporter, periplasmic binding protein.
 
    0.808
ACS19630.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2009 uncharacterized protein UPF0065.
 
    0.803
ACS22216.1
PFAM: conserved hypothetical protein; KEGG: reh:H16_B1846 probable extra-cytoplasmic solute receptor.
 
    0.803
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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