Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ACS18881.1Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: azc:AZC_1503 transcriptional regulator. (190 aa)    
Predicted Functional Partners:
ACS18880.1
Hypothetical protein; KEGG: dac:Daci_2729 helix-turn-helix domain-containing protein.
  
    0.480
ACS18879.1
KEGG: azo:azo2032 hypothetical protein.
       0.469
ACS21810.1
PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: aav:Aave_4597 peptidase C26.
  
  
 0.453
ACS16820.1
Transcriptional regulator, histidine utilization repressor, GntR family; KEGG: aav:Aave_2966 histidine utilization repressor; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.431
ACS17039.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rsk:RSKD131_4320 transcriptional regulator, GntR family.
  
  
 0.431
ACS17444.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_1903 UbiC transcription regulator-associated domain-containing protein.
  
  
 0.431
ACS18082.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: aav:Aave_2205 GntR family transcriptional regulator.
  
  
 0.431
ACS20431.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_0894 UbiC transcription regulator-associated domain-containing protein.
  
  
 0.431
ACS22112.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: bbr:BB2458 GntR family transcriptional regulator.
  
  
 0.431
ACS22663.1
KEGG: dia:Dtpsy_2925 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.431
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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