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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18885.1PFAM: protein of unknown function DUF1486; KEGG: bvi:Bcep1808_5129 hypothetical protein. (134 aa)    
Predicted Functional Partners:
ACS21289.1
KEGG: rpi:Rpic_0523 hypothetical protein.
  
     0.493
ACS22234.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: bpy:Bphyt_6168 cupin 2 conserved barrel domain protein.
 
     0.448
ACS18352.1
PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO0881 alpha/beta family hydrolase.
  
     0.432
ACS22833.1
PFAM: alpha/beta hydrolase fold; KEGG: sme:SM_b20216 putative epoxide hydrolase protein.
  
     0.430
ACS17349.1
KEGG: bxe:Bxe_C0168 putative cytochrome c oxidase subunit I.
  
    0.420
ACS22041.1
PFAM: alpha/beta hydrolase fold; KEGG: smd:Smed_3910 alpha/beta hydrolase fold.
  
     0.413
ACS22040.1
PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_7159 alpha/beta family hydrolase.
  
     0.410
ACS20620.1
KEGG: bid:Bind_0338 putative transmembrane anti-sigma factor.
  
     0.408
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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