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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18901.1KEGG: similar to brain protein 16. (209 aa)    
Predicted Functional Partners:
ACS18897.1
Flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
       0.773
ACS18898.1
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: hch:HCH_04080 flagellar basal-body rod protein FlgC.
       0.773
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: geo:Geob_0493 flagellar hook-basal body complex subunit FliE.
       0.773
ACS18900.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.773
ACS18902.1
PFAM: flagellar assembly protein FliH; KEGG: hypothetical protein.
       0.768
ACS18903.1
ATPase, FliI/YscN family; KEGG: bha:BH2455 flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
       0.768
ACS18904.1
KEGG: similar to coiled-coil domain containing 88.
       0.768
ACS18905.1
KEGG: dac:Daci_1499 hypothetical protein.
       0.768
ACS18906.1
PFAM: flagellar hook capping protein; KEGG: hch:HCH_04072 flagellar hook capping protein.
       0.768
ACS18907.1
PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: sdn:Sden_0060 protein of unknown function DUF1078-like protein.
       0.660
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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