close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18921.1KEGG: reu:Reut_C6183 transposase IS66. (168 aa)    
Predicted Functional Partners:
ACS17322.1
PFAM: IS66 Orf2 family protein; KEGG: pol:Bpro_5536 IS66 Orf2 like.
 
   
 0.773
ACS17323.1
PFAM: transposase IS66; KEGG: tmz:Tmz1t_0278 transposase IS66.
  
     0.763
ACS22554.1
PFAM: IS66 Orf2 family protein; KEGG: aav:Aave_0711 IS66 Orf2 family protein.
 
   
 0.746
ACS17321.1
PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_5537 transposase IS3/IS911.
 
  
 0.545
ACS18922.1
KEGG: sat:SYN_01388 putative cytoplasmic protein.
       0.495
ACS22213.1
KEGG: pol:Bpro_1821 putative transmembrane protein.
  
     0.469
ACS22555.1
PFAM: transposase IS3/IS911 family protein; KEGG: dia:Dtpsy_2521 transposase IS3/IS911 family protein.
 
  
 0.446
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.