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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18924.1Hypothetical protein; KEGG: pau:PA14_43100 putative rhs family protein. (307 aa)    
Predicted Functional Partners:
ACS18925.1
Hypothetical protein.
       0.752
ACS18923.1
PFAM: transposase IS4 family protein; KEGG: mpt:Mpe_B0605 ISRSO18-transposase protein.
     
 0.597
ACS20533.1
Magnesium-translocating P-type ATPase; KEGG: pfl:PFL_4078 magnesium-transporting ATPase MgtA; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase.
   
  
 0.445
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.442
ACS22440.1
KEGG: rfr:Rfer_3041 ABC transporter.
  
 
 0.442
ACS22868.1
PFAM: protein of unknown function DUF692; KEGG: rme:Rmet_4684 hypothetical protein; Belongs to the UPF0276 family.
   
    0.424
ACS22869.1
KEGG: rme:Rmet_4683 hypothetical protein.
   
    0.424
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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