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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18955.1KEGG: bmn:BMA10247_0649 hypothetical protein. (149 aa)    
Predicted Functional Partners:
ACS18956.1
KEGG: bpm:BURPS1710b_A0714 hypothetical protein.
       0.777
ACS18954.1
Galactose oxidase; KEGG: bpl:BURPS1106A_1597 ricin-type beta-trefoil lectin domain/galactose oxidase domain-containing protein; PFAM: Domain of unknown function DUF1929; Kelch repeat protein; Kelch repeat-containing protein; SMART: Kelch repeat-containing protein.
       0.674
ACS16846.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.628
ACS17879.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: dac:Daci_0574 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.613
ACS18157.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: vei:Veis_2874 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.613
ACS18953.1
PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: pna:Pnap_2187 hypothetical protein.
  
    0.503
ACS18951.1
KEGG: ajs:Ajs_2356 exonuclease-like protein.
       0.481
ACS18952.1
PFAM: UvrD/REP helicase; KEGG: ajs:Ajs_2355 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
       0.481
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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