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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18979.1KEGG: pol:Bpro_2357 hypothetical protein. (76 aa)    
Predicted Functional Partners:
ACS18978.1
KEGG: pna:Pnap_2414 hypothetical protein.
       0.803
ACS18977.1
KEGG: bpt:Bpet4854 hypothetical protein.
       0.680
ACS18974.1
PFAM: fatty acid hydroxylase; KEGG: bpt:Bpet4857 putative sterol desaturase.
       0.664
ACS18975.1
PFAM: fatty acid desaturase; KEGG: dac:Daci_1691 fatty acid desaturase.
       0.664
ACS18976.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bpt:Bpet4855 3-oxoacyl-(acyl carrier protein) synthase III.
       0.664
ACS18973.1
PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: rpi:Rpic_4172 phospholipase D/transphosphatidylase.
       0.655
ACS18972.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmj:BMULJ_01129 putative thioredoxin-dependent thiol peroxidase.
       0.483
ACS18971.1
PFAM: Aldehyde Dehydrogenase; KEGG: pol:Bpro_2290 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.453
ACS18980.1
Hypothetical protein.
       0.441
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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