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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19003.1PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family. (281 aa)    
Predicted Functional Partners:
bpt
Arginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
       0.783
aat
leucyl/phenylalanyl-tRNA/protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.783
ACS21321.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet2156 IclR family transcriptional regulator.
  
     0.771
ACS16823.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein IclR; KEGG: pol:Bpro_1041 transcriptional regulator, IclR family.
  
     0.769
ACS21425.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_0796 IclR family transcriptional regulator.
  
     0.766
ACS18760.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bxe:Bxe_A2906 IclR family transcriptional regulator.
  
     0.764
ACS22778.1
Transcriptional regulator, IclR family; PFAM: regulatory protein IclR; SMART: regulatory protein IclR; KEGG: rme:Rmet_1818 transcriptional regulator, IclR family.
  
     0.754
ACS22779.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rme:Rmet_1817 transcriptional regulator, IclR family.
  
     0.751
ACS20215.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: reh:H16_B1281 transcriptional regulator, IclR-family.
  
     0.502
ACS19006.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: pol:Bpro_3394 xanthine dehydrogenase, molybdenum binding subunit apoprotein.
       0.431
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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