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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19010.1KEGG: pol:Bpro_2991 transcriptional regulator, IclR family; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR. (256 aa)    
Predicted Functional Partners:
ACS21321.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet2156 IclR family transcriptional regulator.
  
     0.770
ACS22778.1
Transcriptional regulator, IclR family; PFAM: regulatory protein IclR; SMART: regulatory protein IclR; KEGG: rme:Rmet_1818 transcriptional regulator, IclR family.
  
     0.768
ACS16823.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein IclR; KEGG: pol:Bpro_1041 transcriptional regulator, IclR family.
  
     0.767
ACS18760.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bxe:Bxe_A2906 IclR family transcriptional regulator.
  
     0.766
ACS21425.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_0796 IclR family transcriptional regulator.
  
     0.766
ACS22821.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_1756 IclR family transcriptional regulator.
  
     0.765
ACS16956.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: lch:Lcho_4298 IclR family transcriptional regulator.
  
     0.730
ACS19009.1
KEGG: dac:Daci_4358 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
   
 0.687
ACS17117.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: pol:Bpro_4515 transcriptional regulator, IclR family.
  
     0.669
ACS19011.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: aav:Aave_3964 two component transcriptional regulator.
  
  
 0.615
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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