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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19063.1KEGG: har:HEAR2307 hypothetical protein. (271 aa)    
Predicted Functional Partners:
ACS19064.1
Hypothetical protein; KEGG: bcj:BCAM1041 putative phage coiled coil domain protein.
  
    0.828
ACS19062.1
KEGG: dac:Daci_3204 hypothetical protein.
       0.803
ACS19061.1
Hypothetical protein.
       0.773
ACS19066.1
Hypothetical protein.
       0.478
ACS19083.1
KEGG: bvi:Bcep1808_4523 hypothetical protein.
  
    0.450
ACS19057.1
KEGG: bxe:Bxe_A1211 putative phage-related protein.
       0.448
ACS19052.1
PFAM: integrase family protein; KEGG: bte:BTH_II1011 integrase-like protein; Belongs to the 'phage' integrase family.
       0.444
ACS19053.1
PFAM: Excisionase domain protein; KEGG: pag:PLES_13221 excisionase, putative.
       0.442
ACS19054.1
PFAM: HNH endonuclease; KEGG: bcj:pBCA023 hypothetical protein.
       0.442
ACS19055.1
Hypothetical protein.
       0.442
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.