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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19100.1PFAM: major capsid protein HK97; KEGG: bph:Bphy_7144 HK97 family phage major capsid protein. (483 aa)    
Predicted Functional Partners:
ACS19098.1
TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: mch:Mchl_1602 phage portal protein, HK97 family.
 
 
 0.971
ACS19103.1
KEGG: bph:Bphy_7146 hypothetical protein.
 
 
 0.907
ACS19097.1
PFAM: Terminase; KEGG: net:Neut_1472 phage terminase.
 
   
 0.838
ACS19113.1
KEGG: nwi:Nwi_0795 hypothetical protein.
  
 
 0.794
ACS19096.1
TIGRFAM: phage terminase, small subunit, P27 family; PFAM: terminase small subunit putative P27; KEGG: ppu:PP_3882 phage terminase, small subunit, putative.
 
   
 0.739
ACS19099.1
PFAM: peptidase S14 ClpP; KEGG: hap:HAPS_0606 Clp protease-like protein; Belongs to the peptidase S14 family.
 
    0.725
ACS17846.1
KEGG: cti:RALTA_A1634 hypothetical protein.
   
   0.656
ACS19101.1
KEGG: bph:Bphy_7145 hypothetical protein.
       0.610
ACS19102.1
Hypothetical protein.
       0.572
ACS19105.1
TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: dac:Daci_1638 HK97 family phage protein.
  
    0.569
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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