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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19111.1KEGG: dac:Daci_1643 hypothetical protein. (851 aa)    
Predicted Functional Partners:
ACS19114.1
KEGG: dac:Daci_4081 NLP/P60 protein.
  
  
 0.837
ACS19113.1
KEGG: nwi:Nwi_0795 hypothetical protein.
       0.783
ACS19115.1
KEGG: bph:Bphy_7158 hypothetical protein.
       0.783
ACS19110.1
KEGG: dac:Daci_1642 hypothetical protein.
       0.781
ACS19112.1
Hypothetical protein; KEGG: shn:Shewana3_0168 Ig family protein.
       0.773
ACS19116.1
Hypothetical protein; KEGG: bpm:BURPS1710b_2229 Hep_Hag family protein.
       0.773
ACS19119.1
PFAM: glycoside hydrolase family 24; KEGG: sei:SPC_2723 lysozyme.
  
  
 0.765
ACS19109.1
KEGG: dac:Daci_1641 hypothetical protein.
       0.745
ACS19107.1
KEGG: dac:Daci_1640 hypothetical protein.
       0.737
ACS19108.1
Hypothetical protein.
       0.737
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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