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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19210.1PFAM: protein of unknown function DUF541; KEGG: dia:Dtpsy_2499 protein of unknown function DUF541. (236 aa)    
Predicted Functional Partners:
ACS20242.1
KEGG: aav:Aave_0431 hypothetical protein.
   
    0.681
ACS19209.1
Hypothetical protein.
       0.590
ACS19359.1
KEGG: rfr:Rfer_2125 hypothetical protein.
  
    0.590
ACS18946.1
KEGG: rfr:Rfer_2901 putative inner membrane transmembrane protein.
  
     0.559
ACS20740.1
KEGG: aav:Aave_3642 hypothetical protein.
 
     0.541
ACS20113.1
KEGG: pol:Bpro_3242 putative transmembrane protein.
  
     0.519
ACS17632.1
KEGG: aav:Aave_4223 hypothetical protein.
  
     0.516
ACS18028.1
PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain-containing protein.
  
     0.503
ACS18416.1
TIGRFAM: phasin family protein; KEGG: dia:Dtpsy_1366 phasin family protein.
  
     0.490
ACS17783.1
PFAM: ResB family protein; KEGG: aav:Aave_0985 ResB family protein.
  
     0.483
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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