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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19298.1Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (204 aa)    
Predicted Functional Partners:
ACS19299.1
KEGG: mpt:Mpe_A1322 hypothetical protein.
 
  
 0.963
ACS19296.1
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mpt:Mpe_A1318 putative CoA ligase (AMP forming).
 
     0.956
ACS19302.1
KEGG: mpt:Mpe_A1326 potential 3-hydroxydecyl-(acyl carrier protein) dehydratase.
 
   
 0.955
ACS19297.1
KEGG: mpt:Mpe_A1320 hypothetical protein.
 
     0.951
ACS19300.1
PFAM: polysaccharide deacetylase; KEGG: mpt:Mpe_A1323 polysaccharide deacetylase family protein.
 
     0.950
ACS19294.1
KEGG: mpt:Mpe_A1316 acyl carrier protein.
 
   
 0.945
ACS19301.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: har:HEAR2868 hypothetical protein.
 
     0.942
ACS19295.1
KEGG: mpt:Mpe_A1317 transmembrane protein.
 
     0.941
ACS19303.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A1327 3-ketoacyl-(acyl-carrier-protein) reductase.
 
     0.911
ACS16924.1
KEGG: xca:xccb100_4191 hypothetical protein.
 
    0.800
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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