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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19363.1PFAM: extracellular solute-binding protein family 5; KEGG: pna:Pnap_2017 extracellular solute-binding protein. (598 aa)    
Predicted Functional Partners:
ACS19364.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2421 binding-protein-dependent transport systems inner membrane component.
 
  
 0.971
ACS19365.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2422 binding-protein-dependent transport systems inner membrane component.
 
  
 0.966
ACS19366.1
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_2014 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 0.948
ACS19367.1
PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2822 protein of unknown function DUF1228.
 
     0.699
ACS19362.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_2419 enoyl-[acyl-carrier-protein] reductase [NADH].
     
 0.648
ACS22520.1
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_1444 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 0.588
ACS21834.1
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_0423 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 0.564
ACS18713.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_4004 ABC transporter-related protein.
 
  
 0.558
ACS19361.1
PFAM: ATP dependent DNA ligase; KEGG: vei:Veis_3497 DNA ligase.
       0.533
ACS19622.1
KEGG: vei:Veis_4590 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.522
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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