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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19385.1KEGG: aav:Aave_3368 hypothetical protein. (139 aa)    
Predicted Functional Partners:
ACS19384.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
  
 0.797
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.797
ACS20330.1
PFAM: OmpA/MotB domain protein; KEGG: azo:azo3773 hypothetical protein.
  
     0.745
ACS17186.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mlo:mlr3300 hypothetical protein.
  
     0.621
ACS18878.1
PFAM: type III restriction protein res subunit; DNA primase small subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; KEGG: tmz:Tmz1t_0307 type III restriction protein res subunit.
 
     0.620
ACS18177.1
PFAM: TadE family protein; KEGG: rpi:Rpic_0585 TadE family protein.
  
     0.614
ACS20018.1
PFAM: sulfatase; KEGG: aav:Aave_4610 sulfatase.
  
     0.605
ACS17217.1
Hypothetical protein; KEGG: eba:ebA1686 serine/threonine protein kinase.
  
     0.572
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.564
ACS20421.1
KEGG: pag:PLES_45221 hypothetical protein.
  
     0.545
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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