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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19407.1PFAM: intradiol ring-cleavage dioxygenase; KEGG: pol:Bpro_3458 intradiol ring-cleavage dioxygenase. (190 aa)    
Predicted Functional Partners:
ACS21076.1
KEGG: bph:Bphy_3890 protocatechuate 3,4-dioxygenase, alpha subunit; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase.
 
0.995
ACS19009.1
KEGG: dac:Daci_4358 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
  
 0.973
ACS19942.1
TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: pol:Bpro_1855 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.958
ACS21075.1
TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bcj:BCAM1300 protocatechuate 3,4-dioxygenase beta chain.
  
  
 
0.926
ACS19941.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_1856 4-carboxymuconolactone decarboxylase.
 
  
 0.726
ACS19938.1
4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pst:PSPTO_2346 4-hydroxyphenylpyruvate dioxygenase, putative.
 
   
 0.561
ACS19939.1
PFAM: alpha/beta hydrolase fold; KEGG: pna:Pnap_2121 alpha/beta hydrolase fold.
 
   
 0.556
ACS19408.1
TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rfr:Rfer_2222 hypothetical protein.
       0.519
ACS22018.1
KEGG: sus:Acid_2729 hypothetical protein.
  
     0.443
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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