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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19435.1PFAM: UspA domain protein; KEGG: dia:Dtpsy_0997 UspA domain protein. (147 aa)    
Predicted Functional Partners:
ACS22169.1
PFAM: UspA domain protein; KEGG: mpt:Mpe_A3700 hypothetical protein.
 
     0.686
ACS19436.1
TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_1521 heavy metal translocating P-type ATPase.
     
 0.618
ACS19169.1
PFAM: UspA domain protein; KEGG: mpt:Mpe_A3700 hypothetical protein.
 
     0.599
ACS19437.1
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: aav:Aave_1522 cytochrome oxidase maturation protein, cbb3-type.
  
    0.588
ACS19439.1
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: dia:Dtpsy_1001 cytochrome c oxidase, cbb3-type, subunit II.
  
  
 0.498
ACS19444.1
KEGG: aav:Aave_1531 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.494
ACS19440.1
PFAM: Cbb3-type cytochrome oxidase component; KEGG: rfr:Rfer_1932 Cbb3-type cytochrome oxidase component.
  
  
 0.472
ACS19438.1
KEGG: aav:Aave_1523 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.469
ACS17164.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.446
ACS18655.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.446
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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