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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19450.1PFAM: Hemerythrin HHE cation binding domain protein; KEGG: lch:Lcho_0219 hemerythrin HHE cation binding domain-containing protein. (194 aa)    
Predicted Functional Partners:
ACS21680.1
PFAM: YiaAB two helix domain protein; KEGG: ajs:Ajs_3875 hypothetical protein.
  
     0.682
ACS21719.1
KEGG: pol:Bpro_4643 protein of unknown function DUF1631.
  
     0.648
ACS19420.1
Putative adenylate/guanylate cyclase; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: rfr:Rfer_2284 putative adenylate/guanylate cyclase.
  
     0.604
ACS20094.1
PFAM: protein of unknown function DUF214; KEGG: pna:Pnap_1153 hypothetical protein.
  
     0.589
ACS17558.1
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.575
ACS22871.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bxe:Bxe_A2728 LuxR family transcriptional regulator.
  
     0.535
ACS19382.1
KEGG: pna:Pnap_2002 hypothetical protein.
  
     0.522
ACS18047.1
PFAM: Anti sigma-E protein RseA family protein; KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA.
  
     0.509
ACS19449.1
PFAM: UspA domain protein; KEGG: rfr:Rfer_0916 hypothetical protein.
       0.501
ACS18052.1
KEGG: pol:Bpro_3636 putative transmembrane protein.
  
     0.466
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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