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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19474.1Ankyrin; KEGG: pol:Bpro_2515 ankyrin. (225 aa)    
Predicted Functional Partners:
ACS20686.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: pna:Pnap_0825 NADH dehydrogenase (quinone).
 
 
 0.888
ACS19345.1
KEGG: rfr:Rfer_2106 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; protein of unknown function DUF1605; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; AAA ATPase.
    
 0.852
ACS19475.1
TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: ajs:Ajs_1720 TatD family hydrolase.
       0.852
ACS16912.1
KEGG: xoo:XOO1635 hypothetical protein.
  
 0.837
ACS17011.1
KEGG: pna:Pnap_3497 hypothetical protein.
  
 0.837
ACS20944.1
KEGG: acr:Acry_2758 hypothetical protein.
  
 0.837
ACS20548.1
PFAM: nuclear protein SET; SMART: nuclear protein SET; SET-related domain protein; KEGG: bxe:Bxe_C1219 hypothetical protein.
  
 
 0.811
ACS21803.1
Histone-lysine N-methyltransferase; KEGG: dac:Daci_0883 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET.
  
 
 0.806
ACS17852.1
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.794
ACS20361.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: aav:Aave_3732 beta-ketoacyl synthase.
  
 0.791
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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