Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS19494.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (85 aa)    
Predicted Functional Partners:
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.956
ACS19492.1
KEGG: dia:Dtpsy_1995 hypothetical protein.
       0.773
ACS19495.1
PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein.
       0.594
ACS19897.1
PFAM: HipA domain protein; KEGG: nwi:Nwi_2079 hypothetical protein.
  
   
 0.478
ACS19491.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2668 uncharacterized protein UPF0065.
       0.471
ACS21968.1
PFAM: SpoVT/AbrB domain protein; KEGG: eba:ebA7217 related to putative virulence-associated proteins and nitrogen regulatory protein NtrP.
  
   
 0.470
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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