close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19498.1PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: vei:Veis_3566 extracellular solute-binding protein. (284 aa)    
Predicted Functional Partners:
ACS19499.1
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: vei:Veis_3565 alcohol dehydrogenase.
       0.774
ACS19500.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3564 fis family transcriptional regulator.
 
 
 0.761
ACS19501.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3563 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.732
ACS19502.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3562 ABC transporter related.
  
 
 0.688
ACS19497.1
PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_3566 extracellular solute-binding protein.
 
    
0.639
ACS20285.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3473 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
 
 
 0.522
ACS20284.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pol:Bpro_3472 extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
  
     0.517
ACS20286.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3474 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
 
 
 0.497
ACS19496.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_3567 GntR domain-containing protein.
       0.487
ACS19503.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: vei:Veis_3561 mandelate racemase/muconate lactonizing protein.
       0.472
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.