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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19509.1TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RS03157 hypothetical protein. (471 aa)    
Predicted Functional Partners:
ACS19508.1
KEGG: azc:AZC_0517 hypothetical protein.
 
     0.837
ACS19506.1
KEGG: dal:Dalk_1996 transcriptional regulator, ArsR family.
 
    0.823
ACS19507.1
Putative transcriptional regulator, AsnC family; KEGG: rfr:Rfer_0178 MarR family transcriptional regulator.
  
  
 0.791
ACS21860.1
KEGG: xac:XAC3352 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.750
ACS18265.1
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.710
ACS19505.1
KEGG: rfr:Rfer_0625 hypothetical protein.
 
     0.645
ACS18498.1
KEGG: pol:Bpro_3303 phosphoesterase, PA-phosphatase related.
   
 
 0.604
ACS19131.1
KEGG: dac:Daci_2572 squalene synthase HpnD; TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase.
   
 
 0.604
ACS19132.1
TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: dac:Daci_2573 squalene synthase HpnC.
   
 
 0.604
ACS21466.1
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: mpt:Mpe_A2021 hypothetical protein.
   
 
 0.604
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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