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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19513.1PFAM: Mammalian cell entry related domain protein; KEGG: mms:mma_1054 paraquat-inducible protein B. (548 aa)    
Predicted Functional Partners:
ACS19514.1
PFAM: Paraquat-inducible protein A; KEGG: mms:mma_1053 paraquat-inducible protein A.
 
  
 0.965
ACS19515.1
PFAM: Paraquat-inducible protein A; KEGG: mms:mma_1052 hypothetical protein.
 
  
 0.962
ACS19512.1
PFAM: protein of unknown function DUF330; KEGG: mms:mma_1055 hypothetical protein.
 
   
 0.960
ACS19516.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3366 major facilitator transporter.
       0.731
ACS19517.1
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3365 Bcr/CflA subfamily drug resistance transporter.
  
    0.726
ACS19511.1
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_0667 EmrB/QacA family drug resistance transporter.
       0.485
ACS16670.1
KEGG: nmu:Nmul_A1517 hypothetical protein.
  
     0.456
ACS19518.1
PFAM: peptidase M48 Ste24p; KEGG: aav:Aave_1993 peptidase M48, Ste24p.
       0.421
ACS16888.1
KEGG: aav:Aave_2835 hypothetical protein.
  
     0.418
ACS18788.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB.
  
  
 0.405
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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