close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19520.1PFAM: major facilitator superfamily MFS_1; KEGG: ppg:PputGB1_3110 major facilitator transporter. (390 aa)    
Predicted Functional Partners:
ACS19519.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bpa:BPP0245 hypothetical protein.
       0.791
ACS19401.1
KEGG: dar:Daro_0369 hypothetical protein.
  
     0.720
ACS21293.1
KEGG: reu:Reut_A1068 putative ABC transporter permease protein.
  
     0.650
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
  
 
   0.638
ACS21857.1
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: met:M446_1296 antibiotic biosynthesis monooxygenase.
  
     0.625
ACS19521.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_5000 LysR family transcriptional regulator.
 
     0.622
ACS21072.1
KEGG: dac:Daci_2082 hypothetical protein.
  
     0.622
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.604
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
  
   
 0.598
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
 
   
 0.596
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.