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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19576.1KEGG: mpt:Mpe_A0426 putative mobilization protein MobD. (230 aa)    
Predicted Functional Partners:
ACS19574.1
Putative addiction module antidote protein; KEGG: bpt:Bpet2254 transcriptional regulator.
       0.591
ACS19575.1
TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bpt:Bpet2255 hypothetical protein.
       0.580
ACS19573.1
KEGG: pol:Bpro_4259 putative lipoprotein.
       0.474
ACS21784.1
Hypothetical protein; KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW.
  
     0.404
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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