STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuDAlkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (389 aa)    
Predicted Functional Partners:
ACS19600.1
PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_2421 NADPH-dependent FMN reductase.
 
 0.991
ACS19595.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_2417 binding-protein-dependent transport systems inner membrane component.
 
 0.987
ACS19594.1
KEGG: mms:mma_2619 sulfonate/nitrate transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
 
 0.983
ACS19598.1
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rfr:Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
 
 0.982
ACS18551.1
PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0879 NADPH-dependent FMN reductase.
 
 0.980
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.975
ACS22550.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pla:Plav_0829 taurine dioxygenase.
 
 
 0.940
ACS17629.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bcj:BCAS0426 putative taurine dioxygenase.
 
 
 0.939
ACS20488.1
KEGG: bph:Bphy_5227 substrate-binding region of ABC-type glycine betaine transport system.
 
 
 0.933
ACS20479.1
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family.
 
 
 0.932
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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