STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19623.1PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_4591 extracellular solute-binding protein. (516 aa)    
Predicted Functional Partners:
ACS19624.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4592 binding-protein-dependent transport systems inner membrane component.
 
 0.992
ACS19625.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4593 binding-protein-dependent transport systems inner membrane component.
 
 0.992
ACS19622.1
KEGG: vei:Veis_4590 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.968
ACS19627.1
PFAM: peptidase M55 D-aminopeptidase; KEGG: vei:Veis_4595 peptidase M55, D-aminopeptidase.
 
     0.784
ACS17059.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2813 binding-protein-dependent transport systems inner membrane component.
 
 
 0.771
ACS17866.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3325 binding-protein-dependent transport systems inner membrane component.
 
 
 0.764
ACS17867.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3326 binding-protein-dependent transport systems inner membrane component.
 
 
 0.754
ACS18205.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_5090 binding-protein-dependent transport systems inner membrane component.
 
 
 0.748
ACS17058.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2812 binding-protein-dependent transport systems inner membrane component.
 
 
 0.743
ACS22522.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV2614 ABC transporter, permease protein.
 
 
 0.735
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.