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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19633.1PFAM: protein of unknown function DUF344; KEGG: mpt:Mpe_A3289 polyphosphate:AMP phosphotransferase. (268 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.791
ACS17640.1
PFAM: OmpW family protein; KEGG: har:HEAR0019 outer membrane protein W.
   
    0.758
ACS18860.1
PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pol:Bpro_2995 radical SAM.
   
    0.758
ACS19442.1
TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pol:Bpro_4301 4Fe-4S ferredoxin, iron-sulfur binding.
   
    0.749
ACS18937.1
PFAM: Ppx/GppA phosphatase; KEGG: pol:Bpro_2249 Ppx/GppA phosphatase.
 
 
 0.725
ACS19444.1
KEGG: aav:Aave_1531 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.583
ACS19439.1
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: dia:Dtpsy_1001 cytochrome c oxidase, cbb3-type, subunit II.
   
    0.543
ACS20199.1
PFAM: Di-haem cytochrome c peroxidase; KEGG: bxe:Bxe_B0346 putative cytochrome c peroxidase.
  
    0.490
ACS18121.1
PFAM: phosphate transporter; KEGG: dia:Dtpsy_2706 phosphate transporter.
  
  
 0.487
ACS19438.1
KEGG: aav:Aave_1523 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
   
    0.459
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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