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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19648.1TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A2785 haloacid dehalogenase. (267 aa)    
Predicted Functional Partners:
ACS19650.1
PFAM: ribulose bisphosphate carboxylase small chain; KEGG: mpt:Mpe_A2783 ribulose 1,5-bisphosphate carboxylase small subunit.
 
   
 0.909
ACS19649.1
CbbX protein; KEGG: mpt:Mpe_A2784 AAA type ATPase; TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
 
 
 
 0.895
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
   
 0.892
ACS19644.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: mpt:Mpe_A2789 phosphoribulokinase.
 
   
 0.854
ACS19646.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A2787 phosphoglycolate phosphatase.
  
  
 0.815
fbp
PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: mpt:Mpe_A2788 D-fructose 1,6-bisphosphatase.
 
     0.800
ACS19647.1
KEGG: mpt:Mpe_A2786 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.796
ACS19975.1
PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: reu:Reut_A1258 MFS family nucleoside/H(+) symporter.
  
  
 0.635
ACS19652.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A2781 LysR family transcriptional regulator.
 
     0.619
pgk
PFAM: phosphoglycerate kinase; KEGG: mpt:Mpe_A2792 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
 0.535
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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