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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19688.1PFAM: protein of unknown function DUF201; KEGG: mpt:Mpe_A2621 hypothetical protein. (330 aa)    
Predicted Functional Partners:
ACS19689.1
TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: lch:Lcho_3139 H4MPT-linked C1 transfer pathway protein.
 
  
 0.996
ACS19690.1
Aspartokinase uridylate kinase-like putative kinase; KEGG: lch:Lcho_3140 aspartate/glutamate/uridylate kinase.
 
   
 0.965
ACS19687.1
PFAM: histidine biosynthesis protein; KEGG: lch:Lcho_3137 histidine biosynthesis protein; Belongs to the HisA/HisF family.
 
     0.910
ACS19685.1
TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mpt:Mpe_A2624 formylmethanofuran dehydrogenase, subunit A.
 
   
 0.868
ffsA
Formylmethanofuran/tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.860
ACS19686.1
KEGG: mpt:Mpe_A2623 formylmethanofuran dehydrogenase, subunit B.
 
     0.855
ACS19683.1
KEGG: mpt:Mpe_A2626 formylmethanofuran dehydrogenase, subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein.
 
     0.849
ACS19682.1
TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpt:Mpe_A2627 putative formaldehyde-activating enzyme.
 
     0.835
ACS19692.1
PFAM: protein of unknown function DUF556; KEGG: mpt:Mpe_A2618 hypothetical protein.
 
   
 0.831
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
     0.790
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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