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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19695.1PFAM: flavoprotein; KEGG: mpt:Mpe_A2615 DNA/pantothenate metabolism flavolike protein. (217 aa)    
Predicted Functional Partners:
ACS19700.1
TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; KEGG: lch:Lcho_3149 alpha-L-glutamate ligase; Belongs to the RimK family.
 
  
  0.976
ACS19692.1
PFAM: protein of unknown function DUF556; KEGG: mpt:Mpe_A2618 hypothetical protein.
 
     0.953
ACS19693.1
PFAM: protein of unknown function DUF447; KEGG: lch:Lcho_3142 hypothetical protein.
 
     0.953
ACS19694.1
PFAM: dihydropteroate synthase DHPS; KEGG: mpt:Mpe_A2616 pterin-binding domain-containing protein.
 
     0.953
ACS19704.1
TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; KEGG: lch:Lcho_3153 beta-ribofuranosylaminobenzene 5'-phosphate synthase.
 
    0.808
ACS19686.1
KEGG: mpt:Mpe_A2623 formylmethanofuran dehydrogenase, subunit B.
 
     0.803
ACS19690.1
Aspartokinase uridylate kinase-like putative kinase; KEGG: lch:Lcho_3140 aspartate/glutamate/uridylate kinase.
 
     0.803
ACS19685.1
TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mpt:Mpe_A2624 formylmethanofuran dehydrogenase, subunit A.
 
     0.801
ACS19702.1
PFAM: protein of unknown function DUF201; KEGG: mpt:Mpe_A2608 hypothetical protein.
 
     0.799
ffsA
Formylmethanofuran/tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.795
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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