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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19716.1PFAM: protein of unknown function DUF748; KEGG: pol:Bpro_2872 protein of unknown function DUF748. (1275 aa)    
Predicted Functional Partners:
ACS21528.1
PFAM: VanZ family protein; KEGG: rfr:Rfer_3803 VanZ like protein.
  
     0.711
ACS18643.1
KEGG: aav:Aave_0313 hypothetical protein.
  
  
 0.633
ACS18420.1
KEGG: ajs:Ajs_0255 hypothetical protein.
  
  
 0.626
ACS18263.1
KEGG: ajs:Ajs_2471 hypothetical protein.
  
     0.624
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
    0.605
ACS19715.1
KEGG: vei:Veis_3631 hypothetical protein.
 
     0.598
ACS21082.1
PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 hypothetical protein.
 
   
 0.568
ACS22569.1
KEGG: mpt:Mpe_A1028 hypothetical protein.
  
  
 0.548
ACS21389.1
KEGG: pol:Bpro_0444 hypothetical protein.
  
     0.538
ACS18028.1
PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain-containing protein.
 
     0.523
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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