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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19726.1KEGG: ajs:Ajs_3181 N-terminal methylation site. (143 aa)    
Predicted Functional Partners:
ACS19725.1
TIGRFAM: type IV pilus modification protein PilV; KEGG: ajs:Ajs_3183 type IV pilus modification protein PilV.
 
  
 0.934
ACS19723.1
KEGG: dac:Daci_5190 hypothetical protein.
 
  
 0.919
ACS19724.1
KEGG: pna:Pnap_2911 Tfp pilus assembly protein PilW-like protein.
 
  
 0.919
ACS19722.1
KEGG: pna:Pnap_2913 type 4 fimbrial biogenesis protein PilY1.
 
  
 0.881
ACS19721.1
KEGG: dac:Daci_5198 fimbrial protein pilin.
 
  
 0.811
ACS19454.1
Protein involved in methylation; KEGG: pol:Bpro_2877 methylation.
  
     0.713
ACS19458.1
TIGRFAM: type IV pilus modification protein PilV; KEGG: pol:Bpro_2881 putative type 4 fimbrial biogenesis related transmembrane protein.
 
  
 0.705
ACS19476.1
PFAM: type IV pilus assembly PilZ; KEGG: pol:Bpro_2517 type IV pilus assembly PilZ.
  
   
 0.638
ACS19995.1
PFAM: protein of unknown function DUF58; KEGG: aav:Aave_2162 hypothetical protein.
  
     0.628
ACS19457.1
KEGG: pol:Bpro_2880 putative type 4 fimbrial biogenesis PilW-related protein transmembrane.
 
  
 0.584
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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