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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS19750.1PFAM: class II aldolase/adducin family protein; KEGG: pol:Bpro_0069 class II aldolase/adducin-like. (255 aa)    
Predicted Functional Partners:
ACS19749.1
KEGG: pfl:PFL_1586 hypothetical protein.
 
     0.804
ACS18085.1
PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_3597 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
   
    0.572
ACS18673.1
PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_0580 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
   
    0.572
ACS20512.1
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: dac:Daci_3511 citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
   
    0.572
ACS19751.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B1211 putative transcriptional regulator, LysR family.
       0.546
ACS20400.1
Hypothetical protein.
  
  
 0.508
ACS19748.1
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: reh:H16_B1400 transcriptional regulator CRP family.
       0.488
ACS18592.1
PFAM: ribulose bisphosphate carboxylase large chain; KEGG: pol:Bpro_0032 ribulose 1,5-bisphosphate carboxylase large subunit; Belongs to the RuBisCO large chain family.
  
  
 0.425
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
  
 0.425
ACS20616.1
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); PFAM: 3-dehydroquinate synthase; KEGG: bha:BH1862 L-arabinose utilization protein.
  
  
 0.425
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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